Estimates sparse matrices A or G using fast lasso
regression from mRNA transcript levels Y and CNA profiles U.
Two models are provided, EPoC A where AY + U + R = 0 and EPoC G
where Y = GU + E, the matrices R and E are so far treated as
noise. For details see the reference and the manual page of
‘lassoshooting’.
| Version: |
0.2.4-13 |
| Depends: |
R (≥ 2.12.0), lassoshooting (≥ 0.1.4), Matrix, methods, irr, igraph, elasticnet, survival |
| Suggests: |
graph, RCytoscape |
| Published: |
2011-10-26 |
| Author: |
Rebecka Jornsten, Tobias Abenius, Sven Nelander |
| Maintainer: |
Tobias Abenius <Tobias.Abenius at Chalmers.se> |
| License: |
LGPL-3 |
| CRAN checks: |
epoc results |