cometExactTest: Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.

Version: 0.1.5
Depends: R (≥ 3.4.0)
Imports: dplyr
Published: 2018-01-29
Author: Max Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]
Maintainer: Max Leiserson <mdml at>
License: MIT + file LICENSE
NeedsCompilation: yes
Citation: cometExactTest citation info
CRAN checks: cometExactTest results


Reference manual: cometExactTest.pdf
Package source: cometExactTest_0.1.5.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: cometExactTest_0.1.5.tgz
OS X Mavericks binaries: r-oldrel: cometExactTest_0.1.3.tgz
Old sources: cometExactTest archive


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