PSCBS: Analysis of Parent-Specific DNA Copy Numbers

Segments allele-specific DNA copy number data to detect regions with abnormal copy number within each parental chromosome

Version: 0.23.0
Depends: R.methodsS3 (≥ 1.2.2), R.oo (≥ 1.9.3), R.utils (≥ 1.12.0)
Imports: DNAcopy (≥ 1.24.0), utils, R.rsp (≥ 0.7.5)
Suggests: DNAcopy (≥ 1.24.0), aroma.light (≥ 1.22.0), matrixStats (≥ 0.4.4), R.oo (≥ 1.9.3), R.cache (≥ 0.6.1), digest (≥ 0.5.1), Hmisc (≥ 3.8-3), ggplot2 (≥ 0.8.9)
Published: 2012-03-21
Author: A.B. Olshen, H. Bengtsson, P. Neuvial, P.T. Spellman, R.A. Olshen, V.E. Seshan
Maintainer: Henrik Bengtsson <henrikb at braju.com>
License: GPL (≥ 2)
CRAN checks: PSCBS results

Downloads:

Package source: PSCBS_0.23.0.tar.gz
MacOS X binary: PSCBS_0.23.0.tgz
Windows binary: PSCBS_0.23.0.zip
Reference manual: PSCBS.pdf
Vignettes: Paired PSCBS
News/ChangeLog:NEWS
Old sources: PSCBS archive

Reverse dependencies:

Reverse suggests: aroma.cn, aroma.core