1.4 - added a formula interface through 'iCoxBoost' - added generic function 'coef' for extracting estimated coefficients - added a plot routine that provides coefficient paths - added support for package 'parallel' (removing support for 'multicore' and older R versions) - convergence problems for unpenalized covariates now are catched 1.3 - added option 'criterion' to allow for selection according to unpenalized scores - added 'criterion="hpscore"' and 'criterion="hscore"' for heuristic evaluation of only a subset of covariates in each boosting step - Fixed a bug where results from "predict" without "newdata" and "linear.predictor" in CoxBoost objects would have the wrong order (introduced in 1.2-1) - added missing value check for covariate matrix - implemented observation weights 1.2-2 - fixed a bug in the predict function ocurred when all coefficients were equal to zero - fixed bug where 'estimPVal' would with only one boosting step - 'estimPVal' now also works for zero boosting steps 1.2-1 - improved speed of the core selection routine - added faster code for the special case of binary covariate data - added an option for not returning the matrix with the score statistics for saving memory in applications with a huge number of covariates - optimized memory usage for a large number of covariates - covariates with standard deviation equal to zero now only are centered - a matrix of the employed penalties know is only stored if the penalties, changed. Otherwise the 'element' penalty is just a vector - added support for 'multicore' package for cross-validation and p-value estimation - added an option for fitting on subsets of observations - The coefficient matrix is now stored as a sparse matrix, employing package 'Matrix' - fixed the implementation of the p-value estimation 1.2 - added function 'estimPVal' for permutation-based p-value estimation - improved the speed of the penalty updating code in PathBoost 1.1-1 - fixed bug in print method (introduced in 1.0-1) where the number of non-zero coefficients would be taken from a wrong boosting step 1.1 - implemented penalty modification factors and penalty change distribution via a connection matrix - implemented estimation of models for competing risks 1.0-1 - implemented data adaptive rule for default penalty value - fixed bug where output of the selected covariate would print the wrong name in presence of unpenalized covariates - Boosting now starts a step 0, i.e., also the model before updating any of the coefficients of the penalized covariates is considered. However, the unpenalized covariates will already have non-zero values in boosting step 0. This change breaks code that relies on the size of elements "coefficients", "linear.predictors", or "Lambda" of CoxBoost objects - implements parallel evaluation of cross-validation folds, via package 'snowfall' - speed improvements by replacing 'apply' and 'rbind' , most noticeably for a large number of observations with a small number of covariates 1.0 * initial public release