* using log directory 'd:/Rcompile/CRANpkg/local/2.9/GWAF.Rcheck'
* using R version 2.9.2 Patched (2009-09-02 r49531)
* using session charset: ISO8859-1
* checking for file 'GWAF/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'GWAF' version '1.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GWAF' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
lme.batch: no visible binding for global variable 'kmat'
lme.batch.imputed: no visible binding for global variable 'kmat'
Found possibly global 'T' or 'F' in the following functions:
  GWplot auto gee.lgst gee.lgst.batch gee.lgst.batch.imputed
  gee.lgst.imputed lme.batch lme.batch.imputed lmekin qq
* checking Rd files ... OK
* checking Rd files against version 2 parser ... WARNING
Warning: ./man/GWplot.Rd:6: Unnecessary braces at '{10}'
Warning: ./man/GWplot.Rd:20: Unnecessary braces at '{10}'
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking PDF version of manual ... OK